Building Ontologies with Basic Formal Ontology

Author: Robert Arp
Publisher: MIT Press
ISBN: 026232959X
Category : Science
Languages : en
Pages : 245

Book Description
An introduction to the field of applied ontology with examples derived particularly from biomedicine, covering theoretical components, design practices, and practical applications. In the era of “big data,” science is increasingly information driven, and the potential for computers to store, manage, and integrate massive amounts of data has given rise to such new disciplinary fields as biomedical informatics. Applied ontology offers a strategy for the organization of scientific information in computer-tractable form, drawing on concepts not only from computer and information science but also from linguistics, logic, and philosophy. This book provides an introduction to the field of applied ontology that is of particular relevance to biomedicine, covering theoretical components of ontologies, best practices for ontology design, and examples of biomedical ontologies in use. After defining an ontology as a representation of the types of entities in a given domain, the book distinguishes between different kinds of ontologies and taxonomies, and shows how applied ontology draws on more traditional ideas from metaphysics. It presents the core features of the Basic Formal Ontology (BFO), now used by over one hundred ontology projects around the world, and offers examples of domain ontologies that utilize BFO. The book also describes Web Ontology Language (OWL), a common framework for Semantic Web technologies. Throughout, the book provides concrete recommendations for the design and construction of domain ontologies.

Building Ontologies with Basic Formal Ontology

Author: Robert Arp
Publisher: MIT Press
ISBN: 0262527812
Category : Science
Languages : en
Pages : 245

Scientific Ontology

Author: Anjan Chakravartty
Publisher: Oxford University Press
ISBN: 0190651474
Category : Philosophy
Languages : en
Pages : 288

Book Description
Both science and philosophy are interested in questions of ontology - questions about what exists and what these things are like. Science and philosophy, however, seem like very different ways of investigating the world, so how should one proceed? Some defer to the sciences, conceived as something apart from philosophy, and others to metaphysics, conceived as something apart from science, for certain kinds of answers. This book contends that these sorts of deference are misconceived. A compelling account of ontology must appreciate the ways in which the sciences incorporate metaphysical assumptions and arguments. At the same time, it must pay careful attention to how observation, experience, and the empirical dimensions of science are related to what may be viewed as defensible philosophical theorizing about ontology. The promise of an effectively naturalized metaphysics is to encourage beliefs that are formed in ways that do justice to scientific theorizing, modeling, and experimentation. But even armed with such a view, there is no one, uniquely rational way to draw lines between domains of ontology that are suitable for belief, and ones in which it would be better to suspend belief instead. In crucial respects, ontology is in the eye of the beholder: it is informed by underlying commitments with implications for the limits of inquiry, which inevitably vary across rational inquirers. As result, the proper scope of ontology is subject to a striking form of voluntary choice, yielding a new and transformative conception of scientific ontology.

Formal Ontology in Information Systems

Author: S. Borgo
Publisher: IOS Press
ISBN: 1614999104
Category : Computers
Languages : en
Pages : 278

Book Description
FOIS is the flagship conference of the International Association for Ontology and its Applications (IAOA). Its interdisciplinary research focus lies at the intersection of philosophical ontology, linguistics, logic, cognitive science, and computer science, as well as in the applications of ontological analysis to conceptual modeling, knowledge engineering, knowledge management, information-systems development, library and information science, scientific research, and semantic technologies in general. This volume presents the proceedings of FOIS 2018, held in Cape Town, South Africa, from 19-21 September. It was the 10th edition and 20th anniversary of the conference series. The volume contains 19 papers grouped into 4 sections: Foundations (7 papers), Agents and Properties (4 papers), Methods and Tools (4 papers), and Applications (4 papers). Regarding the applications of ontologies, a broad spectrum of areas is covered, including in particular biology and medicine, IoT, engineering and linguistics. Formal Ontology in Information Systems - Proceedings of the 10th International Conference (FOIS 2018) will be of interest to researchers from all disciplines with an interest in formal ontology.

Ontology Matching

Author: Jérôme Euzenat
Publisher: Springer Science & Business Media
ISBN: 3540496122
Category : Computers
Languages : en
Pages : 332

Book Description
Ontologies are viewed as the silver bullet for many applications, but in open or evolving systems, different parties can adopt different ontologies. This increases heterogeneity problems rather than reducing heterogeneity. This book proposes ontology matching as a solution to the problem of semantic heterogeneity, offering researchers and practitioners a uniform framework of reference to currently available work. The techniques presented apply to database schema matching, catalog integration, XML schema matching and more.

Applied Ontology

Author: Katherine Munn
Publisher: Walter de Gruyter
ISBN: 3110324865
Category : Philosophy
Languages : en
Pages : 342

Book Description
Ontology is the philosophical discipline which aims to understand how things in the world are divided into categories and how these categories are related together. This is exactly what information scientists aim for in creating structured, automated representations, called ‘ontologies,’ for managing information in fields such as science, government, industry, and healthcare. Currently, these systems are designed in a variety of different ways, so they cannot share data with one another. They are often idiosyncratically structured, accessible only to those who created them, and unable to serve as inputs for automated reasoning. This volume shows, in a non-technical way and using examples from medicine and biology, how the rigorous application of theories and insights from philosophical ontology can improve the ontologies upon which information management depends.

New Foundations of Ontology

Author: Gustav Bergmann
Publisher: Univ of Wisconsin Press
ISBN: 9780299131302
Category : Philosophy
Languages : en
Pages : 404

Book Description
This posthumous work by Gustav Bergmann was essentially complete before his death in 1987. In it, he proposes a systematic ontological system that would account for all the basic areas of human thought and experience within an extended framework of logical atomism. Bergmann's approach to traditional problems of ontology seeks to balance the competing demands of phenomenology, which emphasizes the reality presented to us by experience, and of metaphysics, which delineates the most general kinds of existents given in experience and the most general kinds of relationships they bear to one another. Beginning with atomic facts composed of phenomenally presented qualities, Bergmann goes on to develop an ontology that can account for the ordinary objects of everyday experience, the mental states through which we become aware of and acquire knowledge of these objects, and even the truths of logic and mathematics that allow us to extend our thought and discourse about ordinary objects beyond what may be phenomenally apparent. Many ontologists will be particularly interested in the attention Bergmann pays to the concept of logical form. In his earlier works, Bergmann claimed that "the form of the world is in the world"; the "fact" that a thing or a complex has a certain logical or syntactic form, he argued, is itself one more fact of our experienced reality, rather than a contribution of the mind or of linguistic conventions. Critics of this claim have suggested that paradoxes and contradictions result from it. In New Foundations of Ontology Bergmann responds, arguing that his concept of logical form does not necessarily create the problems noted in earlier critiques.

Ontology

Author: Dale Jacquette
Publisher: Routledge
ISBN: 1317489586
Category : Philosophy
Languages : en
Pages : 278

Book Description
The philosophical study of what exists and what it means for something to exist is one of the core concerns of metaphysics. This introduction to ontology provides readers with a comprehensive account of the central ideas of the subject of being. This book is divided into two parts. The first part explores questions of pure philosophical ontology: what is meant by the concept of being, why there exists something rather than nothing, and why there is only one logically contingent actual world. Dale Jacquette shows how logic provides the only possible answers to these fundamental problems. The second part of the book examines issues of applied scientific ontology. Jacquette offers a critical survey of some of the most influential traditional ontologies, such as the distinction between appearance and reality, and the categories of substance and transcendence. The ontology of physical entities - space, time, matter and causation - is examined as well as the ontology of abstract entities such as sets, numbers, properties, relations and propositions. The special problems posed by the subjectivity of mind and of postulating a god are also explored in detail. The final chapter examines the ontology of culture, language and art.

An Introduction to Ontology

Author: Nikk Effingham
Publisher: John Wiley & Sons
ISBN: 0745665470
Category : Philosophy
Languages : en
Pages : 230

Book Description
In this engaging and wide-ranging new book, Nikk Effingham provides an introduction to contemporary ontology - the study of what exists - and its importance for philosophy today. He covers the key topics in the field, from the ontology of holes, numbers and possible worlds, to space, time and the ontology of material objects - for instance, whether there are composite objects such as tables, chairs or even you and me. While starting from the basics, every chapter is up-to-date with the most recent developments in the field, introducing both longstanding theories and cutting-edge advances. As well as discussing the latest issues in ontology, Effingham also helpfully deals in-depth with different methodological principles (including theory choice, Quinean ontological commitment and Meinongianism) and introduces them alongside an example ontological theory that puts them into practice. This accessible and comprehensive introduction will be essential reading for upper-level undergraduate and post-graduate students, as well as any reader interested in the present state of the subject.

The Red and the Real

Author: Jonathan Cohen
Publisher: OUP Oxford
ISBN: 0191609609
Category : Philosophy
Languages : en
Pages : 280

Book Description
The Red and the Real offers a new approach to longstanding philosophical puzzles about what colors are and how they fit into the natural world. Jonathan Cohen argues for a role-functionalist treatment of color - a view according to which colors are identical to certain functional roles involving perceptual effects on subjects. Cohen first argues (on broadly empirical grounds) for the more general relationalist view that colors are constituted in terms of relations between objects, perceivers, and viewing conditions. He responds to semantic, ontological, and phenomenological objections against this thesis, and argues that relationalism offers the best hope of respecting both empirical results and ordinary belief about color. He then defends the more specific role functionalist-account by contending that the latter is the most plausible form of color relationalism.